BEAST is a cross-platform program for Bayesian analysis of molecular sequences using MCMC. It is entirely orientated towards rooted, time-measured phylogenies inferred using strict or …

To inform BEAUti/BEAST about the sampling dates of the sequences, go to the Tips menu and select the “Use tip dates” option. By default all the taxa are assumed to have a date of zero …

The BEAUti & The BEAST software packageBayesian Evolutionary Analysis Utility (BEAUti) BEAUti is a graphical user-interface (GUI) application for generating BEAST XML files. It is …

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Mar 22, 2009 · Howdy folks. A few years ago, we were first acquainted with the caring pet-lovers over at Beast Forum, so I figured that we should check back in with them and see if having sex …

Using BEAGLE with BEAST BEAGLE is a high-performance library that can perform the core calculations at the heart of most Bayesian and Maximum Likelihood phylogenetics package. It …

SPREAD 4Note: Unfortunately, our funding to support the hosting of SPREAD 4 on AWS has ended and we need to discontinue this service. The infrastructure is still available at SPREAD …

Installing BEAST BEAST has been developed in Java, which allows the same code to run on any platform that has the Java software installed. We have also created packages for each of the …

FigTree is a program for viewing trees, including summary information produced by TreeAnnotator, and producing publication quality figures.

Running BEAST for the first time This tutorial will guide you through running BEAST and some of its accessory programs to do a simple phylogenetic analysis. If you haven’t already, download …